VGAS Tutorials: RNA-Seq Analysis

RNA-Seq:

  1. Introduction

UMAP (Uniform Manifold Approximation and Projection):

  1. Introduction

  2. The Basics

  3. The Sample Grid

  4. Setting Colours

  5. Heatmap Colours

  6. Sample Grouping & Gene Ordering

  7. Moving and Searching Genes

  8. Schemes

  9. Scatter Plots

  10. Group Reports (including Violin and Expression plots etc.)

  11. Volcano Plots

  12. Exporting UMAP Plots

  13. Saving UMAP Analysis

RTSNE (T-distributed Stochastic Neighbor Embedding)

  1. Coming Soon

RNA SeqHEAT (Heatmap)

  1. Coming Soon